Study Trait PMID N Cohorts SNPs Unit
ADIPOGen Adiponectin 22479202 29347 16 2675208 µg/ml
Akiyama M Body mass index 28892062 173430 3 5961600 IVNT
Alemany S Attention function 27656889 1493 1 239937 RT
arcOGEN Knee and hip osteoarthritis 22763110 18419 1 1279290 log(OR)
Astle W Blood cell traits 27863252 173480 2 29675960 IVNT
Baranzini S Multiple sclerosis 19010793 1861 1 389878 log(OR)
Barban N Reproductive behavior 27798627 305228 56 2474037 years / children
Barber M Response to statin treatment 20339536 3932 3 2588920 IVNT
BPExome Blood pressure 27618447 192763 51 242296 IVNT / log(OR)
Benyamin B Amyotrophic lateral sclerosis 28931804 40136 42 6613543 log(OR)
Bronson P IgA deficiency 27723758 6487 7 9464382 log(OR)
C4D Coronary heart disease 21378988 30482 4 540232 log(OR)
CARDIoGRAM Coronary heart disease 21378990 86995 14 2420360 log(OR)
CARDIoGRAMplusC4D Coronary heart disease 23202125 194427 48 79128 log(OR)
CARDIoGRAMplusC4D Coronary heart disease 26343387 184305 48 9455778 log(OR)
CASP Psoriasis 19680446 2759 3 440117 log(OR)
CHARGE Aortic valve and mitral annular calcification 23388002 6942 3 2499695 log(OR)
CHARGE Fatty acids 21829377 8866 5 2610522 %
CHARGE Fatty acids 23362303 8961 5 2671240 %
CHARGE Fatty acids 24823311 8631 5 2780799 %
CHARGE Fatty acids 25378659 10129 7 2659736 %
CHARGE Fatty acids 25646338 8013 7 2654758 %
CKD-Gen Renal function 20383146 67093 20 2769999 ml/min/1.73m2 / log(OR)
CKD-Gen Albuminuria 21355061 31580 12 2771110 mg/g / log(OR)
CKD-Gen Renal function 26831199 133814 48 2452354 ml/min/1.73m2 / log(OR)
CKD-Gen Albuminuria 26631737 54451 20 2190093 mg/g / log(OR)
COG Neuroblastoma 21124317 4881 1 21124317 log(OR)
CONVERGE Major depressive disorder 26176920 10640 1 6208599 log(OR)
DIAGRAM Type II diabetes 22885922 69033 12 2473250 log(OR)
DIAGRAM Type II diabetes 24509480 110452 4 2915011 log(OR)
DIAGRAM Type II diabetes 26551672 84780 23 45943 log(OR)
DIAGRAM Type II diabetes 28566273 159208 18 12056346 log(OR)
Duerr Inflammatory bowel disease 17068223 1912 2 298345 log(OR)
EAGLE Atopic dermatitis 26482879 103066 22 11296420 log(OR)
EAGLE Preschool internalizing problems 24839885 4596 3 2819926 NA
EGGC Childhood obesity 22484627 13848 14 2442738 log(OR)
EGGC Infant head circumference 22504419 10768 7 2449806 Z-score
EGGC Birthweight 23202124 26836 18 2684393 Z-score
EGGC Puberty growth 23449627 10799 6 2479349 SDS
EGGC Tanner stage 24770850 9918 7 2176503 SDS
EGGC Birthlength 25281659 28459 22 2200745 SDS
EGGC Childhood body mass index 26604143 5756 6 2499318 SDS
EGGC Maternal effects on offspring birthweight 29309628 86379 25 8741106 Z-score
Ferreira M Allergic disease 29083406 360838 13 8307659 log(OR)
Fritsche L Age-related macular degeneration 23455636 59494 15 2422876 log(OR)
Fritsche L Age-related macular degeneration 26691988 33976 26 12023830 log(OR)
GABRIEL Asthma 20860503 26475 24 567589 log(OR)
Gao X Central corneal thickness 28171582 4038 1 6799167 NA
GCAN Anorexia Nervosa 24514567 17767 15 1148224 log(OR)
GEFOS Bone mineral density 22504420 32961 17 2478338 g/cm2
GEFOS Bone mineral density 26367794 32735 14 9955365 Z-score
GEFOS Pediatric musculoskeletal traits 28743860 10414 4 2158506 NA
GIANT BMI and height variability 22982992 129201 38 2417848 Z-score2
GIANT Anthropometric traits 23563607 158855 51 1984813 log(OR)
GIANT Anthropometric traits 23754948 75819 46 2762771 Z-score
GIANT Height 25282103 253280 79 2550858 Z-score
GIANT Adiposity traits 25673412 244441 101 2566629 IVNT
GIANT Body mass index 25673413 339224 125 2555510 IVNT
GIANT Adiposity traits 26426971 73558 114 2407663 IVNT
GIANT Adiposity traits 28443625 205681 68 2449007 IVNT
GIANT Adiposity traits 28448500 169279 55 3060947 IVNT
GIANT Body mass index 29273807 526508 123 245351 IVNT
GliomaScan Glioma 22886559 6811 18 523992 log(OR)
GLGC Lipids 20686565 100184 46 2692413 Z-score
GLGC Lipids 24097068 188577 60 2446981 IVNT
GoKinD Diabetic nephropathy 16775037 1795 1 350108 log(OR)
Gondalia R Particulate matter-associated QT prolongation 28749367 22158 2 2829644 NA
GPC Personality traits 21173776 17375 10 2301862 NA
GPC Neuroticism 25993607 63661 29 6949614 NA
GPC Extraversion 26362575 63030 29 6941603 NA
GUGC Serum urate 23263486 110238 48 2449123 log(OR) / mg/dL
Hammerschlag AR Insomnia 28604731 113006 1 12444915 log(OR)
HRGene Heart rate 23583979 85787 36 2488384 bpm
Hom G Systemic lupus erythematosus 18204098 3094 3 489836 log(OR)
Hou L Bipolar disorder 27329760 40255 8 10082185 log(OR)
Howson JMM Coronary heart disease 28530674 250736 10 79238 log(OR)
Hu Y Chronotype 26835600 122125 1 10000 NA / log(OR)
Hunter D Breast cancer 17529973 2287 4 471011 log(OR)
IBDGC Inflammatory bowel disease 23128233 20672 8 1428749 log(OR)
IBDGC Inflammatory bowel disease 26192919 34652 15 12255196 log(OR)
ICBP Blood pressure 21909115 69395 29 2461325 mmHg
IGAP Alzheimer's Disease 24162737 54162 31 7055881 log(OR)
ILAE Epilepsy 25087078 34853 12 5968968 log(OR)
IMSGC Multiple sclerosis 17660530 2793 1 326872 log(OR)
ISGS Ischemic stroke 17434096 517 1 393391 log(OR)
Ji S Primary sclerosing cholangitis 27992413 14890 3 7891602 log(OR)
Julia A Rheumatoid arthritis 18668548 800 1 546198 log(OR)
Kilpelainen T Leptin 26833098 32161 23 2473865 ngml-1
Kim SK Ankle injury 28957384 99340 1 7816853 log(OR)
Lee JC Crohn's disease progression 28067912 2734 2 8546431 log(OR)
Lemmela S Sciatica 27764105 3962 2 380066 log(OR)
Li H Alzheimer's disease 17998437 1489 1 402704 log(OR)
Li W Gastric cancer and esophageal squamous cell carcinoma 23504502 3998 1 472329 log(OR)
Lu Y Body fat percentage 26833246 100716 56 3228052 INVT
MAGIC 2hr fasting glucose 20081857 15234 9 2401708 mmol/l
MAGIC Glycemic traits 20081858 46186 21 2470476 mmol/l / pmol/l / NA
MAGIC HbA1c 20858683 46368 23 2572402 %
MAGIC Proinsulin 21873549 10701 4 2496073 pmol/l
MAGIC Glycemic traits 22885924 133010 66 64435 mmol/l / pmol/l
MAGIC Insulin secretion 24699409 5318 7 2433996 Z-score
MAGIC Insulin sensitivity index 27416945 16753 7 2423063 NA
MAGIC HbA1c 28898252 123665 50 5951768 %
Maraganore D Parkinson's disease 16252231 886 1 174874 log(OR)
Nakamura M Primary biliary cholangitis 23000144 963 1 425736 log(OR)
Nalls M Parkinsons disease 25064009 108990 15 6552 log(OR)
Nelson CP Coronary heart disease 28714975 148715 1 9024593 log(OR)
Nolte I Heart rate variability 28613276 27257 17 2553131 NA
Offenbacher S Periodontal complex traits 26962152 975 1 2081989 NA
Olfson E Alcohol dependence 22978509 3829 3 916771 log(OR)
Okada Y Rheumatoid arthritis 24390342 80799 22 9739303 log(OR)
Pankratz N Parkinson's disease 21829596 1672 1 318191 log(OR)
PanScan Pancreatic cancer 20101243 7785 20 543436 log(OR)
PGC Attention deficit hyperactivity disorder 20732625 3351 4 1206461 log(OR)
PGC Bipolar disorder 21926972 16731 11 2427220 log(OR)
PGC Major depressive disorder 22472876 18759 9 1235109 log(OR)
PGC Cross disorder 23453885 61220 22 1249699 log(OR)
PGC Schizophrenia 25056061 32295 37 9444230 log(OR)
Phelan M Ovarian cancer 28346442 63347 63 20594648 log(OR)
Prins B Various 28887542 9961 1 25317543 Various
ReproGen Age at menarche 25231870 182416 58 2440330 years
ReproGen Age at menopause 26414677 69360 33 2417400 years
Roederer M Immune system 25772697 448 1 1663216 NA
Saxena R Type II diabetes 17463246 2931 1 389827 log(OR)
Schott JM Posterior cortical atrophy 26993346 10840 16 5925696 log(OR)
Shen X IgG N-glycosylation 28878392 1960 1 5736298 IVNT
Simon-Sanchez J Parkinsons's disease 19915575 5691 1 453173 log(OR)
Smith E Bipolar disorder 19488044 2034 1 697894 log(OR)
Sniekers S Intelligence 28530673 78308 13 12104294 NA
Spracklen CN Lipids 28334899 34374 13 2228508 IVNT
SSGAC Educational attainment 23722424 101069 42 2308215 years / log(OR)
SSGAC Cognitive function 25201988 106736 11 1375066 Z-score
SSGAC Subject well being 27089181 298420 59 2268674 SD
SSGAC Years of education 27225129 328917 64 8146840 years
SSGAC Subject well being 29292387 388538 3 9428182 SD
Stahl E Rheumatoid arthritis 20453842 25712 6 2555823 log(OR)
Stambolian D Visual refractive error 23474815 7280 5 2574241 NA
TAG Smoking 20418890 74035 16 2459118 log(OR) / years / cigarettes/day
TAGC Asthma 29273806 142486 66 2001280 log(OR)
UK Biobank Various NA Various Various 10894596 Various
van der Harst P Coronary heart disease 29212778 547261 2 7947837 log(OR)
van-Rheenen W Amyotrophic lateral sclerosis 27455348 36052 41 7740344 log(OR)
Yeager M Prostate cancer 17401363 2307 1 473737 log(OR)
dbGaP (02/12/2015) Various 17898773 Various Various Various Various
Zhang S Severe gingival inflammation 28459102 4077 1 2082286 log(OR)
NHGRI-EBI GWAS Catalog (24/03/2018) Various 24316577 Various Various Various Various
NHLBI GRASP Catalog (version 2) Various 24931982 Various Various Various Various

 

 

Study Trait PMID N Cohorts SNPs Unit
BIOSQTL eQTL 27918533 2116 1 5658360 NA
BLUEPRINT eQTL 27863251 Various 1 Various NA
eQTL browser eQTL NA Various 1 Various NA
eQTLGen eQTL NA 31684 37 14598939 NA
Framingham eQTL 28122634 5257 1 17576754 NA
Geuvadis eQTL 24037378 462 1 4525221 NA
GTEx (V6p & V7) eQTL 25954001 Various 1 Various NA
MuTHER eQTL 22941192 Various 1 Various NA
Westra H eQTL 24013639 5311 1 797112 NA
eQTL 2017 eQTL NA Various 1 Various NA

 

 

Study Trait PMID N Cohorts SNPs Unit
Folkersen L pQTL 28369058 3394 1 5266821 NA
Suhre K pQTL 28240269 1000 1 497733 NA
Sun B pQTL 29875488 3301 1 10572788 IVNT
Yao C pQTL 30111768 6861 1 76575 NA
pQTL 2017 pQTL NA Various 1 Various NA

 

 

Study Trait PMID N Cohorts SNPs Unit
Draisma H mQTL 26068415 Various 1 2514126 NA
Kettunen J mQTL 27005778 Various 1 12190172 NA
Long T mQTL 28263315 Various 1 184433 NA
Raffler J mQTL 26352407 Various 1 1779456 NA
Shin S mQTL 24816252 Various 1 2576045 NA
mQTL 2017 mQTL NA Various Various Various NA

 

 

Study Trait PMID N Cohorts SNPs Unit
BIOSQTL methQTL 27918533 Various Various 45444941 NA
BLUEPRINT methQTL 27863251 Various Various Various NA
Gaunt T methQTL 27036880 Various Various Various IVNT

 

Diseases and traits

 

PMID Trait N SNPs
22479202 Adiponectin 29347 2675208
28892062 Body mass index 173430 5961600
27656889 Attention function 1493 239937
22763110 Knee and hip osteoarthritis 18419 1279290
27863252 Blood cell traits 173480 29675960
19010793 Multiple sclerosis 1861 389878
27798627 Reproductive behavior 305228 2474037
20339536 Response to statin treatment 3932 2588920
27618447 Blood pressure 192763 242296
28931804 Amyotrophic lateral sclerosis 40136 6613543
27723758 IgA deficiency 6487 9464382
21378988 Coronary heart disease 30482 540232
21378990 Coronary heart disease 86995 2420360
23202125 Coronary heart disease 194427 79128
26343387 Coronary heart disease 184305 9455778
19680446 Psoriasis 2759 440117
23388002 Aortic valve and mitral annular calcification 6942 2499695
21829377 Fatty acids 8866 2610522
23362303 Fatty acids 8961 2671240
24823311 Fatty acids 8631 2780799
25378659 Fatty acids 10129 2659736
25646338 Fatty acids 8013 2654758
20383146 Renal function 67093 2769999
21355061 Albuminuria 31580 2771110
26831199 Renal function 133814 2452354
26631737 Albuminuria 54451 2190093
21124317 Neuroblastoma 4881 21124317
26176920 Major depressive disorder 10640 6208599
22885922 Type II diabetes 69033 2473250
24509480 Type II diabetes 110452 2915011
26551672 Type II diabetes 84780 45943
28566273 Type II diabetes 159208 12056346
17068223 Inflammatory bowel disease 1912 298345
26482879 Atopic dermatitis 103066 11296420
24839885 Preschool internalizing problems 4596 2819926
22484627 Childhood obesity 13848 2442738
22504419 Infant head circumference 10768 2449806
23202124 Birthweight 26836 2684393
23449627 Puberty growth 10799 2479349
24770850 Tanner stage 9918 2176503
25281659 Birthlength 28459 2200745
26604143 Childhood body mass index 5756 2499318
29309628 Maternal effects on offspring birthweight 86379 8741106
29083406 Allergic disease 360838 8307659
23455636 Age-related macular degeneration 59494 2422876
26691988 Age-related macular degeneration 33976 12023830
20860503 Asthma 26475 567589
28171582 Central corneal thickness 4038 6799167
24514567 Anorexia Nervosa 17767 1148224
22504420 Bone mineral density 32961 2478338
26367794 Bone mineral density 32735 9955365
28743860 Pediatric musculoskeletal traits 10414 2158506
22982992 BMI and height variability 129201 2417848
23563607 Anthropometric traits 158855 1984813
23754948 Anthropometric traits 75819 2762771
25282103 Height 253280 2550858
25673412 Adiposity traits 244441 2566629
25673413 Body mass index 339224 2555510
26426971 Adiposity traits 73558 2407663
28443625 Adiposity traits 205681 2449007
28448500 Adiposity traits 169279 3060947
29273807 Body mass index 526508 245351
22886559 Glioma 6811 523992
20686565 Lipids 100184 2692413
24097068 Lipids 188577 2446981
16775037 Diabetic nephropathy 1795 350108
28749367 Particulate matter-associated QT prolongation 22158 2829644
21173776 Personality traits 17375 2301862
25993607 Neuroticism 63661 6949614
26362575 Extraversion 63030 6941603
23263486 Serum urate 110238 2449123
28604731 Insomnia 113006 12444915
23583979 Heart rate 85787 2488384
18204098 Systemic lupus erythematosus 3094 489836
27329760 Bipolar disorder 40255 10082185
28530674 Coronary heart disease 250736 79238
26835600 Chronotype 122125 10000
17529973 Breast cancer 2287 471011
23128233 Inflammatory bowel disease 20672 1428749
26192919 Inflammatory bowel disease 34652 12255196
21909115 Blood pressure 69395 2461325
24162737 Alzheimer's Disease 54162 7055881
25087078 Epilepsy 34853 5968968
17660530 Multiple sclerosis 2793 326872
17434096 Ischemic stroke 517 393391
27992413 Primary sclerosing cholangitis 14890 7891602
18668548 Rheumatoid arthritis 800 546198
26833098 Leptin 32161 2473865
28957384 Ankle injury 99340 7816853
28067912 Crohn's disease progression 2734 8546431
27764105 Sciatica 3962 380066
17998437 Alzheimer's disease 1489 402704
23504502 Gastric cancer and esophageal squamous cell carcinoma 3998 472329
26833246 Body fat percentage 100716 3228052
20081857 2hr fasting glucose 15234 2401708
20081858 Glycemic traits 46186 2470476
20858683 HbA1c 46368 2572402
21873549 Proinsulin 10701 2496073
22885924 Glycemic traits 133010 64435
24699409 Insulin secretion 5318 2433996
27416945 Insulin sensitivity index 16753 2423063
28898252 HbA1c 123665 5951768
16252231 Parkinson's disease 886 174874
23041239 Ischemic stroke 74393 2437986
24656865 Stroke subtypes 3026 5346402
26708676 Ischemic stroke 49324 19097119
26935894 Ischemic stroke 29633 9349595
23000144 Primary biliary cholangitis 963 425736
25064009 Parkinsons disease 108990 6552
28714975 Coronary heart disease 148715 9024593
28613276 Heart rate variability 27257 2553131
26962152 Periodontal complex traits 975 2081989
22978509 Alcohol dependence 3829 916771
24390342 Rheumatoid arthritis 80799 9739303
21829596 Parkinson's disease 1672 318191
20101243 Pancreatic cancer 7785 543436
20732625 Attention deficit hyperactivity disorder 3351 1206461
21926972 Bipolar disorder 16731 2427220
22472876 Major depressive disorder 18759 1235109
23453885 Cross disorder 61220 1249699
25056061 Schizophrenia 32295 9444230
28346442 Ovarian cancer 63347 20594648
28887542 Various 9961 25317543
25231870 Age at menarche 182416 2440330
26414677 Age at menopause 69360 2417400
25772697 Immune system 448 1663216
17463246 Type II diabetes 2931 389827
26993346 Posterior cortical atrophy 10840 5925696
28878392 IgG N-glycosylation 1960 5736298
19915575 Parkinsons's disease 5691 453173
19488044 Bipolar disorder 2034 697894
28530673 Intelligence 78308 12104294
28334899 Lipids 34374 2228508
23722424 Educational attainment 101069 2308215
25201988 Cognitive function 106736 1375066
27089181 Subject well being 298420 2268674
27225129 Years of education 328917 8146840
29292387 Subject well being 388538 9428182
20453842 Rheumatoid arthritis 25712 2555823
23474815 Visual refractive error 7280 2574241
20418890 Smoking 74035 2459118
29273806 Asthma 142486 2001280
UK Biobank Various Various 10894596
29212778 Coronary heart disease 547261 7947837
27455348 Amyotrophic lateral sclerosis 36052 7740344
17401363 Prostate cancer 2307 473737
dbGaP (02/12/2015) Various Various Various
28459102 Severe gingival inflammation 4077 2082286
NHGRI-EBI GWAS Catalog (24/03/2018) Various Various Various
NHLBI GRASP Catalog (version 2) Various Various Various

Gene expression

 

PMID Trait N SNPs
27918533 eQTL 2116 5658360
27863251 eQTL Various Various
eQTL browser eQTL Various Various
eQTLGen eQTL 31684 14598939
28122634 eQTL 5257 17576754
24037378 eQTL 462 4525221
25954001 eQTL Various Various
22941192 eQTL Various Various
24013639 eQTL 5311 797112
eQTL 2017 eQTL Various Various

Metabolites

 

PMID Trait N SNPs
26068415 mQTL Various 2514126
27005778 mQTL Various 12190172
28263315 mQTL Various 184433
26352407 mQTL Various 1779456
24816252 mQTL Various 2576045
mQTL 2017 mQTL Various Various

Proteins

 

PMID Trait N SNPs
28369058 pQTL 3394 5266821
28240269 pQTL 1000 497733
29875488 pQTL 3301 10572788
30111768 pQTL 6861 76575
pQTL 2017 pQTL Various Various

Epigenetics

 

PMID Trait N SNPs
27918533 methQTL Various 45444941
27863251 methQTL Various Various
27036880 methQTL Various Various


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